BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G09LP1|AL426418
(825 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1481 1625 0.0
>3x_Contig1481
Length = 8252
Score = 1625 bits (819), Expect = 0.0
Identities = 823/825 (99%)
Strand = Plus / Minus
Query: 1 gatccaaactatccatttattagaattagaaccgtaatcccacactgacaattgcctttc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3058 gatccaaactatccatttattagaataagaaccgtaatcccacactgacaattgcctttc 2999
Query: 61 cacatctaattcatcgtgcgggcttcctttcgatagacgttctgaatccgattcctggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2998 cacatctaattcatcgtgcgggcttcctttcgatagacgttctgaatccgattcctggaa 2939
Query: 121 agagtcaagttcaaagtttaccacttgctcaccctggggaatggtactcagtgatgacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2938 agagtcaagttcaaagtttaccacttgctcaccctggggaatggtactcagtgatgacac 2879
Query: 181 gctggaattgagtctctgtagaaacatatgtgggttcgtcctcttatgagttgtggtcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2878 gctggaattgagtctctgtagaaacatatgtgggttcgtcctcttatgagttgtggtcat 2819
Query: 241 tgcgaatgataaaagaatcaacaagtcctacccgacaaaaggccaaatgctcaaccggcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2818 tgcgaatgataaaagaatcaacaagtcctacccgacaaaaggccaaatgctcaaccggcg 2759
Query: 301 aatcgaacctcttgtcagtgtaaattgttgacttatataaatcctggtatcttgaattca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2758 aatcgaacctcttgtcagtgtaaattgttgacttatataaatcctggtatcttgaattca 2699
Query: 361 tcgcggttcactgttgtgcatgctggacattgttattttacatcgatgtttcttcttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2698 tcgcggttcactgttgtgcatgctggacattgttattttacatcgatgtttcttcttttt 2639
Query: 421 cagggtttgttcgaggattctttcaaaataagaacatcatttgaacccagattagggaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2638 cagggtttgttcgaggattctttcaaaataagaacatcatttgaacccagattagggaaa 2579
Query: 481 gatagaaacaatacacatagaaccatcaaaaaaggcaatttccatagcttttgaggttag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2578 gatagaaacaatacacatagaaccatcaaaaaaggcaatttccatagcttttgaggttag 2519
Query: 541 atgggagagcgtacttcatttttgggaacctcaataaattgctagtaagaagcggacatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2518 atgggagagcgtacttcatttttgggaacctcaataaattgctagtaagaagcggacatt 2459
Query: 601 gccttagttttatataggtctctggggaaattgtttgctcagattttgaacaaaaagagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2458 gccttagttttatataggtctctggggaaattgtttgctcagattttgaacaaaaagagt 2399
Query: 661 tatgatcgattaahatatatttactttaattaataagataaaaatgtaacgcataaagat 720
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2398 tatgatcgattaaaatatatttactttaattaataagataaaaatgtaacgcataaagat 2339
Query: 721 atttgttaaatttattcttgaggagccaaagcagagatcttggcagcaacacgggccttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2338 atttgttaaatttattcttgaggagccaaagcagagatcttggcagcaacacgggccttt 2279
Query: 781 ctttcttctctggtcaacttgacttgtctgtatttcttggattca 825
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2278 ctttcttctctggtcaacttgacttgtctgtatttcttggattca 2234
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6954
Number of Sequences: 1807
Number of extensions: 6954
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 825
length of database: 10,358,551
effective HSP length: 16
effective length of query: 809
effective length of database: 10,329,639
effective search space: 8356677951
effective search space used: 8356677951
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)